Function reference • tlf

Atom Plots

Functions for creating base plots

addErrorbar(): addErrorbar

addLine(): addLine

addRibbon(): addRibbon

addScatter(): addScatter

initializePlot(): initializePlot

Molecule Plots

Functions for creating advanced plots

plotBoxWhisker(): plotBoxWhisker

plotCumulativeTimeProfile(): plotCumulativeTimeProfile

plotDDIRatio(): plotDDIRatio

plotGrid(): Create a plot grid

plotHistogram(): plotHistogram

plotObservedTimeProfile(): plotObservedTimeProfile

plotObsVsPred(): plotObsVsPred

plotPieChart(): plotPieChart

plotPKRatio(): plotPKRatio

plotQQ(): plotQQ

plotResVsPred(): plotResVsPred

plotResVsTime(): plotResVsTime

plotSimulatedTimeProfile(): plotSimulatedTimeProfile

plotTimeProfile(): plotTimeProfile

plotTornado(): plotTornado

Updating Plots

Functions for updating plot properties

setBackground(): setBackground

setBackgroundPanelArea(): setBackgroundPanelArea

setBackgroundPlotArea(): setBackgroundPlotArea

setCaptionColor(): setCaptionColor

setCaptionFill(): setCaptionFill

setCaptionLabels(): setCaptionLabel

setCaptionLinetype(): setCaptionLinetype

setCaptionOrder(): setCaptionOrder

setCaptionShape(): setCaptionShape

setCaptionSize(): setCaptionSize

setCaptionVisibility(): setCaptionVisibility

setLegend(): setLegend

setLegendCaption(): setLegendCaption

setLegendFont(): setLegendFont

setLegendPosition(): setLegendPosition

setLegendTitle(): setLegendTitle

setPlotExport(): setPlotExport

setPlotExportDimensions(): setPlotExportDimensions

setPlotExportFormat(): setPlotExportFormat

setPlotExportSize(): setPlotExportSize

setPlotLabels(): setPlotLabels

setXAxis(): setXAxis

setXGrid(): setXGrid

setY2Axis(): setY2Axis

setYAxis(): setYAxis

setYGrid(): setYGrid

setGrid(): setGrid

addWatermark(): addWatermark

createWatermarkGrob(): createWatermarkGrob

setWatermark(): setWatermark

updateExportDimensionsForLegend(): updateExportDimensionsForLegend

updateTimeProfileLegend(): updateTimeProfileLegend

getBoxWhiskerMeasure(): getBoxWhiskerMeasure

getDefaultCaptions(): getDefaultCaptions

getDualAxisPlot(): getDualAxisPlot

getGreekTickLabels(): getGreekTickLabels

getGuestValues(): getGuestValues

getGuestValuesFromDataMapping(): getGuestValuesFromDataMapping

getLabelWithUnit(): getLabelWithUnit

getLegendCaption(): getLegendCaption

getLegendPosition(): getLegendPosition

getLinesFromFoldDistance(): getLinesFromFoldDistance

getLnTickLabels(): getLnTickLabels

getLogTickLabels(): getLogTickLabels

getPercentileTickLabels(): getPercentileTickLabels

getPiTickLabels(): getPiTickLabels

getPKRatioMeasure(): getPKRatioMeasure

getSameLimits(): getSameLimits

getSqrtTickLabels(): getSqrtTickLabels

getSymmetricLimits(): getSymmetricLimits

geomTLFPoint(): geomTLFPoint

PlotConfiguration Classes

Classes defining plot properties

AxisConfiguration: AxisConfiguration

BackgroundConfiguration: BackgroundConfiguration

BackgroundElement: BackgroundElement

BoxWhiskerPlotConfiguration: BoxWhiskerPlotConfiguration

CumulativeTimeProfilePlotConfiguration: CumulativeTimeProfilePlotConfiguration

DDIRatioPlotConfiguration: DDIRatioPlotConfiguration

ExportConfiguration: ExportConfiguration

HistogramPlotConfiguration: HistogramPlotConfiguration

LabelConfiguration: LabelConfiguration

LegendConfiguration: LegendConfiguration

LineElement: LineElement

ObsVsPredPlotConfiguration: ObsVsPredPlotConfiguration

PieChartPlotConfiguration: PieChartPlotConfiguration

PKRatioPlotConfiguration: PKRatioPlotConfiguration

PlotConfiguration: PlotConfiguration

PlotGridConfiguration: Class for creating a plot grid

QQPlotConfiguration: QQPlotConfiguration

ResVsPredPlotConfiguration: ResVsPredPlotConfiguration

ResVsTimePlotConfiguration: ResVsTimePlotConfiguration

TimeProfilePlotConfiguration: TimeProfilePlotConfiguration

TornadoPlotConfiguration: TornadoPlotConfiguration

XAxisConfiguration: XAxisConfiguration

YAxisConfiguration: YAxisConfiguration

asLabel(): asLabel

.sanitizeLabel(): Sanitize Label Text

Label: Label

Font: Font

FontFaces: FontFaces

setLegendFont(): setLegendFont

ThemeFont: ThemeFont

DataMapping Classes

Classes defining what data to plot

BoxWhiskerDataMapping: BoxWhiskerDataMapping

CumulativeTimeProfileDataMapping: CumulativeTimeProfileDataMapping

DDIRatioDataMapping: DDIRatioDataMapping

Grouping: Grouping

GroupMapping: GroupMapping

HistogramDataMapping: HistogramDataMapping

ObservedDataMapping: ObservedDataMapping

ObsVsPredDataMapping: ObsVsPredDataMapping

PieChartDataMapping: PieChartDataMapping

PKRatioDataMapping: PKRatioDataMapping

QQDataMapping: QQDataMapping

RangeDataMapping: RangeDataMapping

ResVsPredDataMapping: ResVsPredDataMapping

ResVsTimeDataMapping: ResVsTimeDataMapping

TimeProfileDataMapping: TimeProfileDataMapping

TornadoDataMapping: TornadoDataMapping

XYDataMapping: XYDataMapping

XYGDataMapping: XYGDataMapping

getLinesFromFoldDistance(): getLinesFromFoldDistance

Summary and Aggregation Helpers

Classes, functions and objects summarizing data

`mean-1.96sd`(): mean-1.96sd

`mean+1.96sd`(): mean+1.96sd

`mean+sd`(): mean+sd

`mean-sd`(): mean-sd

`median-1.5IQR`(): median-1.5IQR

`median-IQR`(): median-IQR

`median+1.5IQR`(): median+1.5IQR

`median+IQR`(): median+IQR

`Percentile0%`(): Percentile0%

`Percentile1%`(): Percentile1%

`Percentile10%`(): Percentile10%

`Percentile100%`(): Percentile100%

`Percentile15%`(): Percentile15%

`Percentile2.5%`(): Percentile2.5%

`Percentile20%`(): Percentile20%

`Percentile25%-1.5IQR`(): Percentile25%-1.5IQR

`Percentile25%`(): Percentile25%

`Percentile5%`(): Percentile5%

`Percentile50%`(): Percentile50%

`Percentile75%+1.5IQR`(): Percentile75%+1.5IQR

`Percentile75%`(): Percentile75%

`Percentile80%`(): Percentile80%

`Percentile85%`(): Percentile85%

`Percentile90%`(): Percentile90%

`Percentile95%`(): Percentile95%

`Percentile97.5%`(): Percentile97.5%

`Percentile99%`(): Percentile99%

AggregationInput: AggregationInput

AggregationSummary: AggregationSummary

getBoxWhiskerMeasure(): getBoxWhiskerMeasure

getPKRatioMeasure(): getPKRatioMeasure

isBetween(): isBetween

getGuestValues(): getGuestValues

getGuestValuesFromDataMapping(): getGuestValuesFromDataMapping

Enum Helpers

Enums listing available values for specific properties

AestheticFields: AestheticFields

AestheticProperties: AestheticProperties

AestheticSelectionKeys: AestheticSelectionKeys

Alignments: Alignments

AtomPlots: AtomPlots

ColorMaps: ColorMaps

ColorPalettes: ColorPalettes

DataMappings: DataMappings

DefaultDataMappingValues: DefaultDataMappingValues

Directions: Directions

ExportFormats: ExportFormats

ExportUnits: ExportUnits

FontFaces: FontFaces

HorizontalJustification: HorizontalJustification

LegendPositions: LegendPositions

LegendTypes: LegendTypes

Linetypes: Linetypes

MoleculePlots: MoleculePlots

PlotAnnotationTextSize: PlotAnnotationTextSize

PlotConfigurations: PlotConfigurations

Scaling: Scaling

Shapes: Shapes

TagPositions: TagPositions

TickLabelTransforms: TickLabelTransforms

tlfStatFunctions: tlfStatFunctions

VerticalJustification: VerticalJustification

Shiny Apps

Shiny applications

runPlotMaker(): runPlotMaker

runThemeMaker(): runThemeMaker

Themes

Functions and classes defining default plot properties.

Theme: Theme

useDarkTheme(): useDarkTheme

useExcelTheme(): useExcelTheme

useHighChartTheme(): useHighChartTheme

useMatlabTheme(): useMatlabTheme

useMinimalTheme(): useMinimalTheme

useTemplateTheme(): useTemplateTheme

useTheme(): useTheme

ThemeAestheticMaps: ThemeAestheticMaps

ThemeAestheticSelections: ThemeAestheticSelections

ThemeBackground: ThemeBackground

ThemeFont: ThemeFont

ThemePlotConfigurations: ThemePlotConfigurations

saveThemeToJson(): saveThemeToJson

loadThemeFromJson(): loadThemeFromJson

runThemeMaker(): runThemeMaker

Default Settings

Functions defining default package settings.

setDefaultAggregationBins(): setDefaultAggregationBins

setDefaultAggregationFunctions(): setDefaultAggregationFunctions

setDefaultAggregationLabels(): setDefaultAggregationLabels

setDefaultAlphaRatio(): setDefaultAlphaRatio

setDefaultErrorbarCapSize(): setDefaultErrorbarCapSize

setDefaultExportParameters(): setDefaultExportParameters

setDefaultLegendPosition(): setDefaultLegendPosition

setDefaultLegendTitle(): setDefaultLegendTitle

setDefaultLLOQLinetype(): setDefaultLLOQLinetype

setDefaultLogTicks(): setDefaultLogTicks

setDefaultMaxCharacterWidth(): setDefaultMaxCharacterWidth

setDefaultWatermark(): setDefaultWatermark

getDefaultCaptions(): getDefaultCaptions

Exporting Plots

Functions for saving and exporting plots.

exportPlot(): exportPlot

exportPlotConfigurationCode(): exportPlotConfigurationCode