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Atom Plots

Functions for creating base plots

addErrorbar()
addErrorbar
addLine()
addLine
addRibbon()
addRibbon
addScatter()
addScatter
initializePlot()
initializePlot

Molecule Plots

Functions for creating advanced plots

plotBoxWhisker()
plotBoxWhisker
plotDDIRatio()
plotDDIRatio
plotHistogram()
plotHistogram
plotObsVsPred()
plotObsVsPred
plotPKRatio()
plotPKRatio
plotResVsPred()
plotResVsPred
plotResVsTime()
plotResVsTime
plotTimeProfile()
plotTimeProfile
plotTornado()
plotTornado

Updating Plots

Functions for updating plot properties

setBackground()
setBackground
setBackgroundPanelArea()
setBackgroundPanelArea
setBackgroundPlotArea()
setBackgroundPlotArea
setCaptionColor()
setCaptionColor
setCaptionFill()
setCaptionFill
setCaptionLabels()
setCaptionLabel
setCaptionLinetype()
setCaptionLinetype
setCaptionOrder()
setCaptionOrder
setCaptionShape()
setCaptionShape
setCaptionSize()
setCaptionSize
setCaptionVisibility()
setCaptionVisibility
setLegend()
setLegend
setLegendCaption()
setLegendCaption
setLegendFont()
setLegendFont
setLegendPosition()
setLegendPosition
setLegendTitle()
setLegendTitle
setPlotExport()
setPlotExport
setPlotExportDimensions()
setPlotExportDimensions
setPlotExportFormat()
setPlotExportFormat
setPlotExportSize()
setPlotExportSize
setPlotLabels()
setPlotLabels
setXAxis()
setXAxis
setXGrid()
setXGrid
setYAxis()
setYAxis
setYGrid()
setYGrid
setGrid()
setGrid
setWatermark()
setWatermark
updateExportDimensionsForLegend()
updateExportDimensionsForLegend
updateTimeProfileLegend()
updateTimeProfileLegend

PlotConfiguration Classes

Classes defining plot properties

BoxWhiskerPlotConfiguration
BoxWhiskerPlotConfiguration
DDIRatioPlotConfiguration
DDIRatioPlotConfiguration
HistogramPlotConfiguration
HistogramPlotConfiguration
ObsVsPredPlotConfiguration
ObsVsPredPlotConfiguration
PKRatioPlotConfiguration
PKRatioPlotConfiguration
PlotConfiguration
PlotConfiguration
TimeProfilePlotConfiguration
TimeProfilePlotConfiguration
TornadoPlotConfiguration
TornadoPlotConfiguration

DataMapping Classes

Classes defining what data to plot

BoxWhiskerDataMapping
BoxWhiskerDataMapping
DDIRatioDataMapping
DDIRatioDataMapping
Grouping
Grouping
GroupMapping
GroupMapping
HistogramDataMapping
HistogramDataMapping
ObservedDataMapping
ObservedDataMapping
ObsVsPredDataMapping
ObsVsPredDataMapping
PKRatioDataMapping
PKRatioDataMapping
RangeDataMapping
RangeDataMapping
ResVsPredDataMapping
ResVsPredDataMapping
ResVsTimeDataMapping
ResVsTimeDataMapping
TimeProfileDataMapping
TimeProfileDataMapping
TornadoDataMapping
TornadoDataMapping
XYDataMapping
XYDataMapping
XYGDataMapping
XYGDataMapping
getLinesFromFoldDistance()
getLinesFromFoldDistance

Enum Helpers

Enums listing available values for specific properties

AestheticProperties
AestheticProperties
Alignments
Alignments
ExportFormats
ExportFormats
ExportUnits
ExportUnits
FontFaces
FontFaces
HorizontalJustification
HorizontalJustification
LegendPositions
LegendPositions
Linetypes
Linetypes
PlotAnnotationTextSize
PlotAnnotationTextSize
Scaling
Scaling
Shapes
Shapes
TagPositions
TagPositions
TickLabelTransforms
TickLabelTransforms
tlfStatFunctions
tlfStatFunctions
VerticalJustification
VerticalJustification

Shiny Apps

Shiny applications

runPlotMaker()
runPlotMaker
runThemeMaker()
runThemeMaker

Themes

Functions and classes defining default plot properties.

Theme
Theme
useDarkTheme()
useDarkTheme
useExcelTheme()
useExcelTheme
useHighChartTheme()
useHighChartTheme
useMatlabTheme()
useMatlabTheme
useMinimalTheme()
useMinimalTheme
useTemplateTheme()
useTemplateTheme
useTheme()
useTheme
saveThemeToJson()
saveThemeToJson
runThemeMaker()
runThemeMaker

Default Settings

Functions defining default package settings.

setDefaultAggregationBins()
setDefaultAggregationBins
setDefaultAggregationFunctions()
setDefaultAggregationFunctions
setDefaultAggregationLabels()
setDefaultAggregationLabels
setDefaultExportParameters()
setDefaultExportParameters
setDefaultLegendPosition()
setDefaultLegendPosition
setDefaultLegendTitle()
setDefaultLegendTitle
setDefaultLogTicks()
setDefaultLogTicks
setDefaultWatermark()
setDefaultWatermark