Set Parameters of an Expression Profile Building Block

Sets one or more parameter values in an expression profile building block by providing the corresponding quantity paths and values. The number of paths and values must be equal.

Usage

setExpressionProfileParameters(
  expressionProfileBuildingBlock,
  quantityPaths,
  quantityValues,
  units
)

Arguments

expressionProfileBuildingBlock

A BuildingBlock object as returned by createExpressionProfileBuildingBlock().

quantityPaths

A character vector of quantity paths to set.

quantityValues

A numeric vector of values to assign. Must have the same length as quantityPaths.

units

A character vector of units corresponding to the quantity values. Must have the same length as quantityPaths. Units must be compatible with the dimensions of the corresponding quantities in the building block. If a single string is provided, it will be used for all quantities.

Value

expressionProfileBuildingBlock, invisibly.

Details

Note: Setting initial conditions of an expression profile is currently not supported.

Examples

expressionProfile <- createExpressionProfileBuildingBlock(
  type = ExpressionProfileCategories$`Metabolizing Enzyme`,
  moleculeName = "CYP3A4",
  speciesName = "Human"
)
setExpressionProfileParameters(
  expressionProfile,
  quantityPaths = c("Organism|Kidney|Intracellular|CYP3A4|Relative expression"),
  quantityValues = c(1.0),
  units = ""
)