Create a simulation configuration from modules. — createSimulationConfiguration • ospsuite

This function calls the SimulationConfiguration constructor.

Usage

createSimulationConfiguration(
  modules,
  individual = NULL,
  expressionProfiles = NULL,
  selectedInitialConditions = NULL,
  selectedParameterValues = NULL,
  settings = NULL
)

Arguments

modules: A list of MoBiModule objects from which to create the simulation. The order of modules defines the order in which the modules will be combined to a simulation!
individual: Optional, an IndividualBuildingBlock.
expressionProfiles: Optional, a list of expression profiles to apply to the simulation.
selectedInitialConditions: By default, the first Initial Conditions (IC) building block (BB) of each module will be selected. If a module has multiple IC BBs, it is possible to specify which IC BB to apply by providing a named list, where the name should be the name of the module and the value the name of the IC BB. If NULL, all modules will use the first IC BB, if available. When providing a list, the value can also be set to NULL, which means that no IC BB from the specified module will be selected.
selectedParameterValues: By default, the first Parameter Values (PV) building block (BB) of each module will be selected. If a module has multiple PV BBs, it is possible to specify which PV BB to apply by providing a named list, where the name should be the name of the module and the value the name of the PV BB. If NULL, all modules will use the first PV BB, if available. When providing a list, the value can also be set to NULL, which means that no PV BB from the specified module will be selected.
settings: Optional, a SimulationSettings object defining the simulation settings. If no settings are provided, default settings will be used upon simulation creation.

Value

A SimulationConfiguration object.