Get a data.frame of projects, type, name and parent project
getBBDataFromProjects(projectData, qualificationProjects = NULL)A data.frame with columns `Project`, `Simulation` and `Output`
# Get the project data from a list of paths
snapshotPaths <- list(
"Raltegravir" = file.path(
"https://raw.githubusercontent.com",
"Open-Systems-Pharmacology",
"Raltegravir-Model",
"v1.2",
"Raltegravir-Model.json"
),
"Atazanavir" = file.path(
"https://raw.githubusercontent.com",
"Open-Systems-Pharmacology",
"Atazanavir-Model",
"v1.2",
"Atazanavir-Model.json"
)
)
projectData <- getProjectsFromList(snapshotPaths)
# Get the simulations Observed Data from the projects
getBBDataFromProjects(projectData)
#> Project BB-Type
#> 1 Raltegravir Individual
#> 2 Raltegravir Compound
#> 3 Raltegravir Protocol
#> 4 Raltegravir Protocol
#> 5 Raltegravir Protocol
#> 6 Raltegravir Protocol
#> 7 Raltegravir Protocol
#> 8 Raltegravir Protocol
#> 9 Raltegravir Protocol
#> 10 Raltegravir Protocol
#> 11 Raltegravir Protocol
#> 12 Raltegravir Protocol
#> 13 Raltegravir Protocol
#> 14 Raltegravir Protocol
#> 15 Raltegravir Event
#> 16 Raltegravir Formulation
#> 17 Raltegravir Formulation
#> 18 Raltegravir Formulation
#> 19 Raltegravir Formulation
#> 20 Raltegravir Simulation
#> 21 Raltegravir Simulation
#> 22 Raltegravir Simulation
#> 23 Raltegravir Simulation
#> 24 Raltegravir Simulation
#> 25 Raltegravir Simulation
#> 26 Raltegravir Simulation
#> 27 Raltegravir Simulation
#> 28 Raltegravir Simulation
#> 29 Raltegravir Simulation
#> 30 Raltegravir Simulation
#> 31 Raltegravir Simulation
#> 32 Raltegravir Simulation
#> 33 Raltegravir Simulation
#> 34 Raltegravir Simulation
#> 35 Raltegravir Simulation
#> 36 Atazanavir Individual
#> 37 Atazanavir Individual
#> 38 Atazanavir Individual
#> 39 Atazanavir Individual
#> 40 Atazanavir Individual
#> 41 Atazanavir Individual
#> 42 Atazanavir Individual
#> 43 Atazanavir Individual
#> 44 Atazanavir Individual
#> 45 Atazanavir Compound
#> 46 Atazanavir Protocol
#> 47 Atazanavir Protocol
#> 48 Atazanavir Protocol
#> 49 Atazanavir Protocol
#> 50 Atazanavir Protocol
#> 51 Atazanavir Protocol
#> 52 Atazanavir Protocol
#> 53 Atazanavir Protocol
#> 54 Atazanavir Protocol
#> 55 Atazanavir Protocol
#> 56 Atazanavir Protocol
#> 57 Atazanavir Event
#> 58 Atazanavir Event
#> 59 Atazanavir Formulation
#> 60 Atazanavir Simulation
#> 61 Atazanavir Simulation
#> 62 Atazanavir Simulation
#> 63 Atazanavir Simulation
#> 64 Atazanavir Simulation
#> 65 Atazanavir Simulation
#> 66 Atazanavir Simulation
#> 67 Atazanavir Simulation
#> 68 Atazanavir Simulation
#> 69 Atazanavir Simulation
#> 70 Atazanavir Simulation
#> 71 Atazanavir Simulation
#> 72 Atazanavir Simulation
#> 73 Atazanavir Simulation
#> 74 Atazanavir Simulation
#> 75 Atazanavir Simulation
#> 76 Atazanavir Simulation
#> 77 Atazanavir Simulation
#> 78 Atazanavir Simulation
#> BB-Name
#> 1 Standard European Male for PEQ
#> 2 Raltegravir
#> 3 Iwamoto 2008 400mg PO (Figure 1) omeprazole study
#> 4 Iwamoto 2008 10mg PO (Figure 2) Safety-Tolerability-PK study
#> 5 Iwamoto 2008 25mg PO (Figure 2) Safety-Tolerability-PK study
#> 6 Iwamoto 2008 50mg PO (Figure 2) Safety-Tolerability-PK study
#> 7 Iwamoto 2008 100mg PO (Figure 2) Safety-Tolerability-PK study
#> 8 Iwamoto 2008 200mg PO (Figure 2) Safety-Tolerability-PK study
#> 9 Iwamoto 2008 800mg PO (Figure 2) Safety-Tolerability-PK study
#> 10 Iwamoto 2008 1200mg PO (Figure 2) Safety-Tolerability-PK study
#> 11 Iwamoto 2008 1600mg PO (Figure 2) Safety-Tolerability-PK study
#> 12 Markowitz 2006 100mg bid 10d
#> 13 Markowitz 2006 200mg bid 10d
#> 14 Markowitz 2006 400mg bid 10d
#> 15 Food
#> 16 Weibull (lactose formulation)
#> 17 chewable tablet
#> 18 filmcoated tablet (original Merck formulation)
#> 19 Weibull (granules)
#> 20 Raltegravir 800 mg (lactose formulation)
#> 21 Raltegravir 10 mg (lactose formulation)
#> 22 Raltegravir 100 mg (lactose formulation)
#> 23 Raltegravir 1200 mg (lactose formulation)
#> 24 Raltegravir 1600 mg (lactose formulation)
#> 25 Raltegravir 200 mg (lactose formulation)
#> 26 Raltegravir 25 mg (lactose formulation)
#> 27 Raltegravir 50 mg (lactose formulation)
#> 28 Raltegravir 400mg chewable fasted
#> 29 Raltegravir 400mg filmcoated tablet
#> 30 Raltegravir 400mg (lactose formulation)
#> 31 Raltegravir 100 mg filmcoated tablet md
#> 32 Raltegravir 200 mg filmcoated tablet md
#> 33 Raltegravir 400 mg filmcoated tablet md
#> 34 Raltegravir 400mg (granules in suspension)
#> 35 Raltegravir 400mg chewable fed
#> 36 Agarwala2003
#> 37 Agarwala2005a
#> 38 Agarwala2005b
#> 39 Martin2008
#> 40 Zhu2011
#> 41 WhiteAmericanMale
#> 42 WhiteAmericanFemale
#> 43 Zhu2010
#> 44 Acosta2007
#> 45 Atazanavir
#> 46 400mg_QD_7days
#> 47 400mg_QD_6days
#> 48 400mg_QD_5days
#> 49 200mg_QD_5days
#> 50 800mg_QD_5days
#> 51 400mg_SD
#> 52 300mg_BID_7days_at120h
#> 53 300mg_BID
#> 54 200mg_QD_6days
#> 55 300mg_QD_10days
#> 56 800mg_QD_6days
#> 57 High-fat breakfast
#> 58 Light meal
#> 59 Reyataz capsule
#> 60 Acosta2007_300mg
#> 61 Agarwala2003_400mg
#> 62 Agarwala2005a_400mg
#> 63 Agarwala2005b_400mg
#> 64 Martin2008_400mg
#> 65 Zhu2011_400mg
#> 66 FDA-ClinPharmReview_AI424-014_400mg_YoungFemales
#> 67 FDA-ClinPharmReview_AI424-028_200mg
#> 68 FDA-ClinPharmReview_AI424-028_400mg
#> 69 FDA-ClinPharmReview_AI424-040_200mg
#> 70 FDA-ClinPharmReview_AI424-040_400mg
#> 71 FDA-ClinPharmReview_AI424-040_800mg
#> 72 FDA-ClinPharmReview_AI424-056_300mg
#> 73 FDA-ClinPharmReview_AI424-076_400mg
#> 74 FDA-ClinPharmReview_AI424-076_800mg
#> 75 Zhu2010_300mg_Atazanavir
#> 76 FDA-ClinPharmReview_AI424-004_400mg_TreatmentA
#> 77 FDA-ClinPharmReview_AI424-014_400mg_YoungMales
#> 78 FDA-ClinPharmReview_AI424-015_400mg_NormalSubjects
#> Parent-Project
#> 1
#> 2
#> 3
#> 4
#> 5
#> 6
#> 7
#> 8
#> 9
#> 10
#> 11
#> 12
#> 13
#> 14
#> 15
#> 16
#> 17
#> 18
#> 19
#> 20
#> 21
#> 22
#> 23
#> 24
#> 25
#> 26
#> 27
#> 28
#> 29
#> 30
#> 31
#> 32
#> 33
#> 34
#> 35
#> 36
#> 37
#> 38
#> 39
#> 40
#> 41
#> 42
#> 43
#> 44
#> 45
#> 46
#> 47
#> 48
#> 49
#> 50
#> 51
#> 52
#> 53
#> 54
#> 55
#> 56
#> 57
#> 58
#> 59
#> 60
#> 61
#> 62
#> 63
#> 64
#> 65
#> 66
#> 67
#> 68
#> 69
#> 70
#> 71
#> 72
#> 73
#> 74
#> 75
#> 76
#> 77
#> 78